GeneMark | Tool name | GeneMark |
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| URL | http://exon.biology.gatech.edu/eukhmm.cgi#prot |
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| Important features | |
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| Citations | Borodovsky M, Lomsadze A, Ivanov N, Mills R. Eukaryotic gene prediction using GeneMark.hmm. Curr Protoc Bioinformatics. 2003 May;Chapter 4:Unit4.6. PubMed
PMID: 18428701.
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| Year of publication | 2003 |
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| Rank by usage frequency | 100 |
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| Comments | 1) Results can be obtained by e-mail. 2) Gene information includes the Gene number and strand type. 3) Frame information is also given. |
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| Function | Exon detail, Exon detail: number, Exon detail: start/end, Exon detail: length, Exon detail direct information, Gene Information, Species, Finds alternative splicing in human, Finds alternative splicing in mouse, Finds alternative splicing in Arabidopsis, Finds alternative splicing in Drosophila, Finds alternative splicing in other species |
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| Category | |
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| Input file format | Sequence in FASTA format |
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| Output file format | |
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| Limitation | |
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